PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G198800.2.p
Common NamePRUPE_ppa006041mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 381aa    MW: 42574.9 Da    PI: 6.7465
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G198800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.6e-14167218155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  Prupe.2G198800.2.p 167 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 218
                         79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.01E-13165222No hitNo description
PROSITE profilePS5088815.777166217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-17166235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-14167231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-11167218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-11172223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MPFLQMLQTV NSPPPYFPLK EPSFQALLRL HHLKNPWELG KAYMPEMETQ LQTALEIESC  60
VTHDMVELHS PVKSEAKDLH NHPHSVSAGN LEAVSSECIQ DQEQPNSAEI NCCRKGNNSS  120
GSPPPTWAQA QNEPEQTQYP KSPPVTRERR KRKRTRPTKN KEEVESQRMT HIAVERNRRR  180
QMNDHLNVLR SLMPTSYIQR GDQASIVGGA IDFVKELEQL LQSLEAQKRM RRADQGSNGD  240
NSFSSSSSSS SASMAMPSNG MFMSLSQCRI GSHEEGTTTT HLEDEVTAQN KSEAADIDVT  300
VIQTHVNLKI QCQRRAGQLM KAILALEDLR LTVLHLNITS SQDTVLYSFN LKIEEGCKLG  360
SADEIARAVH QIFSFIDGCS *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148153RRKRKR
2167178RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894300.0KP689430.1 Prunus pseudocerasus isolate Unigene20562 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218040.10.0hypothetical protein PRUPE_ppa006041mg
TrEMBLM5WZZ70.0M5WZZ7_PRUPE; Uncharacterized protein
STRINGVIT_15s0048g02510.t011e-147(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.12e-73bHLH family protein